Package: CTD 1.3

CTD: A Method for 'Connecting The Dots' in Weighted Graphs

A method for pattern discovery in weighted graphs as outlined in Thistlethwaite et al. (2021) <doi:10.1371/journal.pcbi.1008550>. Two use cases are achieved: 1) Given a weighted graph and a subset of its nodes, do the nodes show significant connectedness? 2) Given a weighted graph and two subsets of its nodes, are the subsets close neighbors or distant?

Authors:Varduhi Petrosyan [aut, cre], Lillian Thistlethwaite [aut]

CTD_1.3.tar.gz
CTD_1.3.zip(r-4.7-any)CTD_1.3.zip(r-4.6-any)CTD_1.3.zip(r-4.5-any)
CTD_1.3.tgz(r-4.6-any)CTD_1.3.tgz(r-4.5-any)
CTD_1.3.tar.gz(r-4.7-any)CTD_1.3.tar.gz(r-4.6-any)
CTD_1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CTD/json (API)

# Install 'CTD' in R:
install.packages('CTD', repos = c('https://vpetrosyan.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

2.70 score 1 scripts 309 downloads 44 mentions 18 exports 11 dependencies

Last updated from:8ced1dbae4. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK155
source / vignettesOK230
linux-releaseOK138
macos-releaseOK341
macos-oldrelOK272
windows-develOK89
windows-releaseOK83
windows-oldrelOK84
wasm-releaseOK139

Exports:data.combineDatadata.imputeDatadata.surrogateProfilesdata.zscoreDatagraph.connectToExtgraph.diffuseP1graph.diffusionSnapShotgraph.naivePruninggraph.netWalkSnapShotmle.getEncodingLengthmle.getMinPtDistancemle.getPtBSbyKmle.getPtDistmultiNode.getNodeRankssingleNode.getNodeRanksNstat.entropyFunctionstat.fishersMethodstat.getDirSim

Dependencies:clicpp11glueigraphlatticelifecyclemagrittrMatrixpkgconfigrlangvctrs